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Accelrys biovia discovery studio v2021
Biovia Discovery Studio V2021, supplied by Accelrys, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/discovery+studio+v2021/2021+biovia+discovery+studio/pmc13247285-81-24-24
Average 86 stars, based on 1 article reviews
biovia discovery studio v2021 - by Bioz Stars, 2026-10
86/100 stars

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Binding Assay:

Article Title: Bioinformatics-Guided Discovery of miRNAs Involved in Apoptosis Modulated by Parthenolide Combined with Vincristine in The NALM6 Cell Line
Article Snippet: .. The bases involved in binding with ligands were displayed by biovia discovery studio v2021 and the positions of miRNAs and ligands relative to each other were checked by UCSF-Chimera v1.16. .. Next, to check the binding affinity of the ligands in the presence of each other, the complexes of all the ligands with miRNAs were made by the biovia discovery studio v2021, and the complexes were again subjected to molecular docking with AutoDock Vina in the same way as before ( , ).

Article Title: Insights on the interaction mechanism of sesquiterpene coumarin (7-geranyloxycoumarin) to double-strand DNA by multispectral techniques and molecular docking
Article Snippet: In this study, various spectroscopic methods, including UV-Vis spectrophotometry, fluorescence (competitive and non-competitive studies and binding thermodynamic parameters determine) and Fourier transform infrared (FTIR) spectroscopies, viscometry, and molecular docking simulation, have been used to study the interaction of the bioactive 7-geranyloxycoumarin, auraptene (AUR), with calf thymus DNA (CT-DNA) as a model.. According to the data, the AUR-CT-DNA association constant (Kb) is around 7.3×104 M 1, which is appropriate for the groove binding mode.. Fluorescence experiments showed that the AUR-CT-DNA complex formation process has a dynamic fluorescence-enhancing mechanism.

Article Title: Catharanthine, an anticancer vinca alkaloid: an in silico and in vitro analysis of the autophagic system as the major mechanism of cell death in liver HepG2 cells.
Article Snippet: .. Docking results were selected based on affinity binding, and the residues involved in ligand binding were visualized using Biovia Discovery Studio v2021 (Khan et al. 2022). ..

Article Title: Bioinformatics-Guided Discovery of miRNAs Involved in Apoptosis Modulated by Parthenolide Combined with Vincristine in The NALM6 Cell Line
Article Snippet: The bases involved in binding with ligands were displayed by biovia discovery studio v2021 and the positions of miRNAs and ligands relative to each other were checked by UCSF-Chimera v1.16. .. Next, to check the binding affinity of the ligands in the presence of each other, the complexes of all the ligands with miRNAs were made by the biovia discovery studio v2021, and the complexes were again subjected to molecular docking with AutoDock Vina in the same way as before ( , ). .. Statistical analysis was conducted using GraphPad Prism (version 8.4.3, GraphPad Software, Inc. USA).

Article Title: In silico molecular docking and ADMET prediction of biogenic zinc oxide nanoparticles: characterization, and in vitro antimicrobial and photocatalytic activity
Article Snippet: .. The binding pattern that represented the highest negative energy was considered the best-docked model that was further used to visualize binding sites and calculate non-bonding interactions using the BIOVIA Discovery Studio v2021 software. .. The AdmetSAR and PRO TOX-II ( https://tox-new.charite.de/protox_II/ ) online server was used for screening in silico ADMET (absorption, distribution, metabolism, excretion, and toxicity) properties of ZnO NPs as drug candidate while CHL was used as standard drug.

Ligand Binding Assay:

Article Title: Catharanthine, an anticancer vinca alkaloid: an in silico and in vitro analysis of the autophagic system as the major mechanism of cell death in liver HepG2 cells.
Article Snippet: .. Docking results were selected based on affinity binding, and the residues involved in ligand binding were visualized using Biovia Discovery Studio v2021 (Khan et al. 2022). ..

Article Title: Catharanthine, an anticancer vinca alkaloid: an in silico and in vitro analysis of the autophagic system as the major mechanism of cell death in liver HepG2 cells
Article Snippet: .. Docking results were selected based on affinity binding, and the residues involved in ligand binding were visualized using Biovia Discovery Studio v2021 (Biovia, 2021). ..

Software:

Article Title: In silico molecular docking and ADMET prediction of biogenic zinc oxide nanoparticles: characterization, and in vitro antimicrobial and photocatalytic activity
Article Snippet: .. The binding pattern that represented the highest negative energy was considered the best-docked model that was further used to visualize binding sites and calculate non-bonding interactions using the BIOVIA Discovery Studio v2021 software. .. The AdmetSAR and PRO TOX-II ( https://tox-new.charite.de/protox_II/ ) online server was used for screening in silico ADMET (absorption, distribution, metabolism, excretion, and toxicity) properties of ZnO NPs as drug candidate while CHL was used as standard drug.



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